PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00800.1.g00130.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 386aa    MW: 41851.6 Da    PI: 8.1873
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00800.1.g00130.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71e-16100149255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +gr++AeIrdp     +  r +lg+f+tae+Aa a++ a++ ++g
  Zpz_sc00800.1.g00130.1.am.mk 100 RYRGVRRRP-WGRFAAEIRDPM----SkERRWLGTFDTAEQAACAYDIAARVMRG 149
                                   69*******.**********84....35999********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.91E-2799159No hitNo description
SuperFamilySSF541711.44E-21100158IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.6E-30100158IPR001471AP2/ERF domain
PfamPF008471.7E-9100149IPR001471AP2/ERF domain
SMARTSM003801.5E-34100163IPR001471AP2/ERF domain
PROSITE profilePS5103222.787100157IPR001471AP2/ERF domain
PRINTSPR003674.6E-9101112IPR001471AP2/ERF domain
PRINTSPR003674.6E-9123139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0009880Biological Processembryonic pattern specification
GO:0010084Biological Processspecification of organ axis polarity
GO:0048825Biological Processcotyledon development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MSRRRGSSLS SLSISSAPTP RRAPNIQSFA NGCNPGHRPS RESHFDRPVS LRNDPHPVMD  60
DTDANAHLYG HTHAHNHRSR RSSRAGAVDE DGDVSPKMAR YRGVRRRPWG RFAAEIRDPM  120
SKERRWLGTF DTAEQAACAY DIAARVMRGN KARTNFPVQA TAGCWPWGPS KVAAPDHMLS  180
PFILHNLLMS SSDHGGCRLL QHAAQGHANV ASATNRPPPV LPPRLCSTVS SPSGTVPTPA  240
GAVTSSVASP LGAQLDDDDD DDVWGSLLQG DPPGAGLLQD ALHDFYPTTR PRGTSRKPGA  300
DAIVRARTKQ DWNEAFRTAS TYGGDDVDED GDYPLMPQGL LGDMIQVPSF VDFHGRAVSS  360
LVPRPTDLMD PARTLQPSHA CMHGTY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A5e-19101163669ATERF1
2gcc_A5e-19101163669ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004955046.11e-88PREDICTED: ethylene-responsive transcription factor 3-like
TrEMBLK3YYH52e-88K3YYH5_SETIT; Uncharacterized protein
STRINGSi019328m4e-88(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72633050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.12e-20ERF family protein